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archive api  (Informix Software Inc)

 
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    Informix Software Inc archive api
    Archive Api, supplied by Informix Software Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/archive+api/us09152345-68-17-27?v=Informix+Software+Inc
    Average 90 stars, based on 1 article reviews
    archive api - by Bioz Stars, 2026-06
    90/100 stars

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    Overview of the PRIDE dataset submission, validation, storage and dissemination process. Researchers submit datasets to PRIDE Archive using the ProteomeXchange Submission Tool, which supports multiple data formats (e.g. MS raw files, processed result files, mzTab, mzIdentML, peak lists and SDRF-Proteomics). Data transfer is facilitated through services like Aspera, FTP, and the newly added Globus service. Submitted datasets are processed by PRIDE Pipelines, which perform automatic validation, submission, resubmission and publication of the private datasets. Validated datasets are stored in the PRIDE Archive, where they can be accessed via various REST APIs (e.g. PRIDE Archive Rest API, PRIDE USI Rest API, PRIDE Stream API and PRIDE Crosslinking API). These datasets are further disseminated through PRIDE’s web applications, including PRIDE Spectral Libraries, PRIDE USI and PRIDE Crosslinking, as well as external resources such as Expression Atlas, UniProt, Ensembl, OmicsDI, BioSamples and ProteomeXchange.

    Journal: Nucleic Acids Research

    Article Title: The PRIDE database at 20 years: 2025 update

    doi: 10.1093/nar/gkae1011

    Figure Lengend Snippet: Overview of the PRIDE dataset submission, validation, storage and dissemination process. Researchers submit datasets to PRIDE Archive using the ProteomeXchange Submission Tool, which supports multiple data formats (e.g. MS raw files, processed result files, mzTab, mzIdentML, peak lists and SDRF-Proteomics). Data transfer is facilitated through services like Aspera, FTP, and the newly added Globus service. Submitted datasets are processed by PRIDE Pipelines, which perform automatic validation, submission, resubmission and publication of the private datasets. Validated datasets are stored in the PRIDE Archive, where they can be accessed via various REST APIs (e.g. PRIDE Archive Rest API, PRIDE USI Rest API, PRIDE Stream API and PRIDE Crosslinking API). These datasets are further disseminated through PRIDE’s web applications, including PRIDE Spectral Libraries, PRIDE USI and PRIDE Crosslinking, as well as external resources such as Expression Atlas, UniProt, Ensembl, OmicsDI, BioSamples and ProteomeXchange.

    Article Snippet: The PRIDE Archive USI API ( https://www.ebi.ac.uk/pride/molecules/ws/swagger-ui/index.html ) allows users to retrieve specific spectra from PRIDE Archive files from Thermo Scientific instruments (see section ‘PRIDEArchive USI: Accessing and Visualizing mass spectra’).

    Techniques: Expressing